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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798323.1_cds_XP_016459618.1_5275
CDS Infomation

[gene=LOC107783156] [db_xref=GeneID:107783156] [protein=omega-3 fatty acid desaturase, chloroplastic-like] [protein_id=XP_016459618.1] [location=join(2525..3015,3120..3209,3295..3361,3431..3523,3615..3800,3901..3981,4236..4373,4498..4677)] [gbkey=CDS]
Sequence

ATGGCAAGTTGGGTTTTATCAGAATGTGGTCTTAGACCACTCCCAAGAATCTACCCTAAG
CCCAGAACTGGGGCAGCCACTTCTGCCTCCTCTCACATTAAGTTGAGAATTTCACGTACA
GATCTGAGTGGTTCTGCAATTTCTTTGTCTAATACTAATAAAGAGAGGAATTGGGCATTG
AGGGTAAGTGCACCACTTAGGATCCAAACTGTCGGAGAAGAAGAAAGTGAGAGAACAAAT
AATAGTGGTGGTGAGTTTTTTGACCCAGGGGCACCCCCACCATTTAAGTTGTCTGATATT
AAGGCAGCTATTCCTAAGCATTGTTGGGTCAAGAATCCGTGGAAATCTATGAGTTATGTT
GTGAGGGATGTTGCTATTGTATTTGGATTGGCAGCTGCGGCTGCTTATTTCAACAATTGG
GTTGTTTGGCCTTTGTATTGGTTTGCTCAGAGTACTATGTTTTGGGCTCTCTTTGTTCTT
GGTCATGATTGTGGACATGGAAGTTTTTCAAATAACCACAAGTTGAATAGTGTCGTTGGA
CATATCCTTCATTCTTCAATTCTTGTTCCTTACCATGGATGGAGAATAAGTCATAGGACA
CATCATCAGAACCATGGACATGTTGAGAATGATGAGTCATGGCATCCTATACCTGAGAAG
ATTTACAATAGTTTGGATCTTGCCACAAAGAAATTAAGGTTCACTCTACCCTTTCCCTTG
TTGGCATACCCTTTCTATCTGTGGAGTAGAAGCCCTGGAAAGAAAGGGTCTCACTTTGAT
CCAAACAGTGATTTGTTTGTTCCAAGTGAGAAGAAAGATGTGATGACTTCAACTCTGTGT
TGGACAGCAATGGCTGCATTGCTAGTGGGATTGTCCTTTGTGATGGGTCCTTTCCAAGTG
CTTAAGCTCTATGGCATCCCCTATTGGGGCTTTGTCATGTGGCTTGACTTAGTTACCTAC
TTGCATCACCATGGTCATGATGATAAACTTCCTTGGTACAGAGGAGAGGAATGGAGTTAT
CTTAGAGGAGGGCTTACAACGCTTGATCGCGATTATGGATGGATCAACAACATCCACCAT
GACATAGGAACACATGTGATACATCATTTATTCCCTCAAATTCCACACTATCATTTGGTG
GAAGCAACTGAAGCTGCTAAGCCAGTGTTAGGGAAGTATTATAAGGAGCCAAAGAAGTCA
GGGCCTCTACCATTTTACTTGTTAGGAGTTCTCATAAAGAGTATGAAGCAGGATCACTAT
GTGAGTGACACTGGTGATATAGTATATTACCGAACTGATCCCCAACTCTCAGGGTTTCAG
AAATAG

Peptide Sequence

PEP ID

XP_016459618.1
PEP Infomation

PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana tabacum]
Sequence

MASWVLSECGLRPLPRIYPKPRTGAATSASSHIKLRISRTDLSGSAISLSNTNKERNWAL
RVSAPLRIQTVGEEESERTNNSGGEFFDPGAPPPFKLSDIKAAIPKHCWVKNPWKSMSYV
VRDVAIVFGLAAAAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNNHKLNSVVG
HILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPIPEKIYNSLDLATKKLRFTLPFPL
LAYPFYLWSRSPGKKGSHFDPNSDLFVPSEKKDVMTSTLCWTAMAALLVGLSFVMGPFQV
LKLYGIPYWGFVMWLDLVTYLHHHGHDDKLPWYRGEEWSYLRGGLTTLDRDYGWINNIHH
DIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPKKSGPLPFYLLGVLIKSMKQDHY
VSDTGDIVYYRTDPQLSGFQK

Transcript Sequence

Gene sequence data has not been registered.